Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
IPVCNIDTNDLAKCRPAVT----GNNPPPP----GPDCCAVARVANLQCLCPYK-----PY---LPT-VG----ID---------PSRVRPL--LANCGVNSPSCF
1BEA Chain:A ((14-109))
-------HNPLPSCRWYVTSRTCGIGPRLPWPELKRRCCRELADIPAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFAATLVTEAECNLATI---
General information:
TITO was launched using:
RESULT:
Template:
1BEA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9149 for 332 contacts (-27.6/contact) +
2D Compatibility (PS) -6799 + (NN) -3520 + (LL) 520
1D Compatibility (HY) 400 + (ID) 900
Total energy: -19448.0 ( -58.58 by residue)
QMean score : 0.474
(partial model without unconserved sides chains):
PDB file :
Tito_1BEA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BEA-query.scw
PDB file :
Tito_Scwrl_1BEA.pdb
: