Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
APRGAHGAGECGKTPADKMALKLAPCASAGQDPK-----SA----PSSGCCTAVHTIGKQSPKCLCAVMLSDTA---K------S---AG--------IKPEVAMSI--PKRCNLVDRPVGYKCGAYTLP
1BEA Chain:A ((16-109))
---------------------PLPSCRWYVTSRTCGIGPRLPWPELKRRCCRELADI---PAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFAATLVTEAECNLATI------------
General information:
TITO was launched using:
RESULT:
Template:
1BEA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -25043 for 402 contacts (-62.3/contact) +
2D Compatibility (PS) -6249 + (NN) 709 + (LL) 800
1D Compatibility (HY) -3600 + (ID) 550
Total energy: -33933.0 ( -84.41 by residue)
QMean score : 0.216
(partial model without unconserved sides chains):
PDB file :
Tito_1BEA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BEA-query.scw
PDB file :
Tito_Scwrl_1BEA.pdb
: