Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AEGAGECGRASPDRMALRMAPCISAADEPDS---------------APSSSCCSAVHTIGKSPSCLCAVMLSGTAK----M-AG-----IRPEVAITIPKRCNIADRPVGYKCGDYTLP
1SM7 Chain:A ((14-100))
-----------------HLRACQQWIRQQLAGSPFSENQWGPQQGPSLREQCCNELYQE--DQVCVCPTLKQAAKSVRVQGQHGPFQSTRIYQIAKNLPNVCNMKQ-------------
General information:
TITO was launched using:
RESULT:
Template:
1SM7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -50680 for 400 contacts (-126.7/contact) +
2D Compatibility (PS) -6000 + (NN) 1088 + (LL) 680
1D Compatibility (HY) -2400 + (ID) 500
Total energy: -57812.0 ( -144.53 by residue)
QMean score : 0.133
(partial model without unconserved sides chains):
PDB file :
Tito_1SM7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SM7-query.scw
PDB file :
Tito_Scwrl_1SM7.pdb
: