Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGECGRVPVDQVALKLAPCAAATQNPR----AA-----VPPNCCAQVRSIGRNPKCLCAVMLSNTAR---------S---A--------GVKPAVAMTI--PKRCAIANRPIGYKCGPYTLP
1BEA Chain:A ((16-109))
--------------PLPSCRWYVTSRTCGIGPRLPWPELKRRCCRELADI--PAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFAATLVTEAECNLATI------------
General information:
TITO was launched using:
RESULT:
Template:
1BEA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26169 for 410 contacts (-63.8/contact) +
2D Compatibility (PS) -6295 + (NN) -507 + (LL) 760
1D Compatibility (HY) -4400 + (ID) 600
Total energy: -37211.0 ( -90.76 by residue)
QMean score : 0.233
(partial model without unconserved sides chains):
PDB file :
Tito_1BEA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BEA-query.scw
PDB file :
Tito_Scwrl_1BEA.pdb
: