Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
DGAGECGATPPDKMAL--KLAPCASAAKDPKS---------------------TPSSGCCTAVHTIGKQSPKCLCAVMLSSTT----------RNAGIKPEVAITIPKRCNIADRPVGYKCGDYTLP
1PSY Chain:A ((16-116))
--------QQCRQEVQRKDLSSCERYLRQSSSRRSTGEEVLRMPGDENQQQESQQLQQCCNQVKQV---RDECQCEAIKYIAEDQIQQGQLHGEESERVAQRAGEIVSSCGV---------------
General information:
TITO was launched using:
RESULT:
Template:
1PSY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -25155 for 474 contacts (-53.1/contact) +
2D Compatibility (PS) -7120 + (NN) -3612 + (LL) 60
1D Compatibility (HY) -1600 + (ID) 550
Total energy: -37977.0 ( -80.12 by residue)
QMean score : 0.241
(partial model without unconserved sides chains):
PDB file :
Tito_1PSY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1PSY-query.scw
PDB file :
Tito_Scwrl_1PSY.pdb
: