Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AAPSSAQGTTTPADASGAVPSCASKLVTCAGYLNTTDTPPESCCDPLKEAATTQ-AACMCAILMNKAALQAFGVAPEQGVLLAKR-CGVTNDAS-TCAK-
1HYP Chain:? ((6-80))
-------------------PSC-PDLSICLNILGGSLGTVDDCCALIGGLGDIEAIVCLCIQLRA----LGI-LNLNRNLQLILNSCGRSYPSNATCPRT
General information:
TITO was launched using:
RESULT:
Template:
1HYP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42972 for 442 contacts (-97.2/contact) +
2D Compatibility (PS) -7319 + (NN) -2460 + (LL) 1048
1D Compatibility (HY) -5200 + (ID) 800
Total energy: -57703.0 ( -130.55 by residue)
QMean score : 0.329
(partial model without unconserved sides chains):
PDB file :
Tito_1HYP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HYP-query.scw
PDB file :
Tito_Scwrl_1HYP.pdb
: