Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QTECVSKIVPCFRFLNTTTKPSTDCCNSIKEAMEKD-FSCLCTIYNTPGLLAQFNITTDQALGLNLR-CGVNTDLS-ACSGTLILQDLRPLQL
1HYP Chain:? ((6-80))
-PSC-PDLSICLNILGGSLGTVDDCCALIGGLGDIEAIVCLCIQLR----ALGI-LNLNRNLQLILNSCGRSYPSNATCPRT-----------
General information:
TITO was launched using:
RESULT:
Template:
1HYP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -53855 for 446 contacts (-120.8/contact) +
2D Compatibility (PS) -7132 + (NN) 80 + (LL) 1356
1D Compatibility (HY) -6000 + (ID) 850
Total energy: -66401.0 ( -148.88 by residue)
QMean score : 0.258
(partial model without unconserved sides chains):
PDB file :
Tito_1HYP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HYP-query.scw
PDB file :
Tito_Scwrl_1HYP.pdb
: