Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ALSCGTVSGYVAPCIGYLTQN--GP-----LPRGCCTGVTNLNNMARTTPDRQQACRCLVGAANSFP-------T----LNAARAAGLPKACGVNIPYKISKSTNCNSVR
1HSS Chain:A ((15-106))
--------PALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHI--------SEWCRCGALYSMLDSMYKEHGAFPRCRREVVKLTAASITAVCRLPIVVD-----------
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -53077 for 422 contacts (-125.8/contact) +
2D Compatibility (PS) -6627 + (NN) -958 + (LL) 1072
1D Compatibility (HY) -6400 + (ID) 650
Total energy: -66640.0 ( -157.91 by residue)
QMean score : 0.291
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: