Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LSCSQVTSGLAPCLPYLQG----RGP----------LGGCCSGVKDLLAAAKTPADRKTACTCMKSTANSIK-G----IDAGKAASIPATCGVNIPYKISPSTDCTKVE
1S6D Chain:A ((19-97))
-------EMLNHCGMYLMKNLGERSQVSPRMREEDHKQLCCMQLKNLD--------EKCMCPAIMMMLNEPMWIRMRDQVMSMAHNLPIECNLM---------------
General information:
TITO was launched using:
RESULT:
Template:
1S6D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33925 for 378 contacts (-89.7/contact) +
2D Compatibility (PS) -6118 + (NN) -571 + (LL) 1688
1D Compatibility (HY) -2800 + (ID) 750
Total energy: -42476.0 ( -112.37 by residue)
QMean score : 0.249
(partial model without unconserved sides chains):
PDB file :
Tito_1S6D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S6D-query.scw
PDB file :
Tito_Scwrl_1S6D.pdb
: