Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AVTCGQVTSSLAPCIGYLTG----NGAGG----VPPGCCGGIKSLNSAAQTTPDRQAACKCIKSAAAGIS-------G---IN----------YGIASGP--PGKCGVNIPYKISPSTDCNSVK
1BEA Chain:A ((15-109))
--------NPLPSCRWYVTSRTCGIGPRLPWPELKRRCCRELADI--------PAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFAATLVTEAECNLATI-------------
General information:
TITO was launched using:
RESULT:
Template:
1BEA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -37605 for 409 contacts (-91.9/contact) +
2D Compatibility (PS) -6548 + (NN) -54 + (LL) 1244
1D Compatibility (HY) -4000 + (ID) 600
Total energy: -47563.0 ( -116.29 by residue)
QMean score : 0.289
(partial model without unconserved sides chains):
PDB file :
Tito_1BEA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BEA-query.scw
PDB file :
Tito_Scwrl_1BEA.pdb
: