Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ALSCGQVDSKLAPCVAYVTGRASAISKECCSGVQGLNGLARSSPDRQTACRCL--KSL-ATSIKAINMGKVSGVPGKCGVSVPFPISMSTDCNKVH
1L6H Chain:A ((6-66))
--------GQLTVCTGAIAGG-ARPTAACCSSLRA-----------QQGCFCQFAKDPRYGR--YVNSPNARKAVSSCGIALP-------------
General information:
TITO was launched using:
RESULT:
Template:
1L6H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -23062 for 381 contacts (-60.5/contact) +
2D Compatibility (PS) -5862 + (NN) 69 + (LL) 1596
1D Compatibility (HY) -1600 + (ID) 700
Total energy: -29559.0 ( -77.58 by residue)
QMean score : 0.198
(partial model without unconserved sides chains):
PDB file :
Tito_1L6H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1L6H-query.scw
PDB file :
Tito_Scwrl_1L6H.pdb
: