Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AITCGQVVSSLSQCASYLRN---GG---AV------------PPACCSGVKSLNSAARTTPDRQTVCGCLKRASGGV-------N-----ASNAASLPGKCGVNIPYKISPSTDCSKVQ
1W2Q Chain:A ((22-114))
-------RVNLKPCEQHIMQRIMGEQEQYDSYDIRSTRSSDQQQRCCDELNEME-----N-TQGCMCEALQQIMENQCDRLQDRQMVQQFKRELMSLPQQCNFRAP-------------
General information:
TITO was launched using:
RESULT:
Template:
1W2Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -25004 for 383 contacts (-65.3/contact) +
2D Compatibility (PS) -6262 + (NN) -446 + (LL) 1412
1D Compatibility (HY) -2800 + (ID) 600
Total energy: -33700.0 ( -87.99 by residue)
QMean score : 0.401
(partial model without unconserved sides chains):
PDB file :
Tito_1W2Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1W2Q-query.scw
PDB file :
Tito_Scwrl_1W2Q.pdb
: