Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LSCGDVATQLAPCINYLRSA----GP---------LPPACCNGVKNLKNSAATTQDRRTACKCLINASKSISG-----VNFGLAAGLPGKCGVNIPYKISPSTNCD
1S6D Chain:A ((19-97))
-------EMLNHCGMYLMKNLGERSQVSPRMREEDHKQLCCMQLKNLD--------EKCMCPAIMMMLNEPMWIRMRDQVMSMAHNLPIECNLM------------
General information:
TITO was launched using:
RESULT:
Template:
1S6D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31561 for 404 contacts (-78.1/contact) +
2D Compatibility (PS) -5993 + (NN) -838 + (LL) 800
1D Compatibility (HY) -4400 + (ID) 700
Total energy: -42692.0 ( -105.67 by residue)
QMean score : 0.275
(partial model without unconserved sides chains):
PDB file :
Tito_1S6D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S6D-query.scw
PDB file :
Tito_Scwrl_1S6D.pdb
: