Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ACNPSE------LMACASSIL---QSKPPT----AQCCAKLKE-QQPCFCQYKK---DPSLKGYINPAN---------FKKVAA-CRVQVPKC------------------
1HSS Chain:A ((5-124))
MCYPGQAFQVPALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHISEWCRCGALYSMLDSMYKEHGAFPRCRREVVKLTAASITAVCRLPIVVDASGDGAYVCKDVAAYPDA
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -19965 for 338 contacts (-59.1/contact) +
2D Compatibility (PS) -7118 + (NN) -8873 + (LL) 0
1D Compatibility (HY) -2400 + (ID) 750
Total energy: -39106.0 ( -115.70 by residue)
QMean score : 0.516
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: