Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ANPCNPA--QLTPCAGPALFGGAVPPACCAQLRA-----------QQGCLCGYARSPNYGSY--IRSPNAARLFAICNLPMPRCR
1T12 Chain:A ((1-78))
AITCGQVTSNLAPCLAYLRNTG-PLGRCCGGVKALVNSARTTEDRQIACTC--LKSAA-GAISGINLGKAAGLPSTCGVNIP---
General information:
TITO was launched using:
RESULT:
Template:
1T12.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -25940 for 394 contacts (-65.8/contact) +
2D Compatibility (PS) -6222 + (NN) 682 + (LL) 412
1D Compatibility (HY) -3200 + (ID) 1000
Total energy: -35268.0 ( -89.51 by residue)
QMean score : 0.175
(partial model without unconserved sides chains):
PDB file :
Tito_1T12.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T12-query.scw
PDB file :
Tito_Scwrl_1T12.pdb
: