Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ATICNIDTSKLAECLPAVS----GR-SPPPP-----------TKACCTALLSA--DLHCLCNYKSA-----LPAF-G--I--N-PALAMALPKKCGGSLPPNCKVDAEP
1W2Q Chain:A ((23-112))
--------VNLKPCEQHIMQRIMGEQEQYDSYDIRSTRSSDQQQRCCDELNEMENTQGCMCEALQQIMENQCDRLQDRQMVQQFKRELMSLPQQCNFR-----------
General information:
TITO was launched using:
RESULT:
Template:
1W2Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22224 for 321 contacts (-69.2/contact) +
2D Compatibility (PS) -6765 + (NN) -7848 + (LL) 716
1D Compatibility (HY) -4000 + (ID) 600
Total energy: -40721.0 ( -126.86 by residue)
QMean score : 0.352
(partial model without unconserved sides chains):
PDB file :
Tito_1W2Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1W2Q-query.scw
PDB file :
Tito_Scwrl_1W2Q.pdb
: