Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QSTICKMPVAGLMSCKPSVT----PPNPTA----PSADCCSALSHADLNCLCSYKNSNLLP--------------SL-G--ID----PKLAMQLPGKCKLPHPANC
1B1U Chain:A ((11-109))
-----AIPHNPLDSCRWYVSTRTCGVGPRLATQEMKARCCRQLEAIPAYCRCEAVRILMDGVVTPSGQHEGRLLQDLPGCPRQVQRAFAPKLVTEVECNLATIH--
General information:
TITO was launched using:
RESULT:
Template:
1B1U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -18836 for 443 contacts (-42.5/contact) +
2D Compatibility (PS) -6995 + (NN) -2495 + (LL) 380
1D Compatibility (HY) -2000 + (ID) 800
Total energy: -30746.0 ( -69.40 by residue)
QMean score : 0.269
(partial model without unconserved sides chains):
PDB file :
Tito_1B1U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B1U-query.scw
PDB file :
Tito_Scwrl_1B1U.pdb
: