Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
NGPCSNTLSSLSACMPAIE----GENPQSP----SVACCDVVRGSDASCLCSIVTTYANLT------------DAM-G--IN----LRAALLLPKQCKRAVPSGFTCGEID
1B1U Chain:A ((12-110))
-----IPHNPLDSCRWYVSTRTCGVGPRLATQEMKARCCRQLEAIPAYCRCEAVRILMDGVVTPSGQHEGRLLQDLPGCPRQVQRAFAPKLVTEVECNLATIHG-------
General information:
TITO was launched using:
RESULT:
Template:
1B1U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -53435 for 445 contacts (-120.1/contact) +
2D Compatibility (PS) -7379 + (NN) -2015 + (LL) -64
1D Compatibility (HY) -2000 + (ID) 750
Total energy: -65643.0 ( -147.51 by residue)
QMean score : 0.190
(partial model without unconserved sides chains):
PDB file :
Tito_1B1U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B1U-query.scw
PDB file :
Tito_Scwrl_1B1U.pdb
: