Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QSDCTNVL--ISMSPCLNYITGNSS------TP----S-------SQCCTQLASVVRSSPQCLCQVLNGGGSS----L-GI---EVNKTQAIALPGACNVQTPPISSCN
1W2Q Chain:A ((16-112))
---CERQVDRVNLKPCEQHIMQRIMGEQEQYDSYDIRSTRSSDQQQRCCDELNEME-NTQGCMCEALQQIMENQCDRLQDRQMVQQFKRELMSLPQQCNFR--------
General information:
TITO was launched using:
RESULT:
Template:
1W2Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -45484 for 436 contacts (-104.3/contact) +
2D Compatibility (PS) -6787 + (NN) 949 + (LL) 12
1D Compatibility (HY) -4800 + (ID) 850
Total energy: -56960.0 ( -130.64 by residue)
QMean score : 0.217
(partial model without unconserved sides chains):
PDB file :
Tito_1W2Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1W2Q-query.scw
PDB file :
Tito_Scwrl_1W2Q.pdb
: