Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QSTICKMPVAGLMSCKPSVT----PPNPTA----PSADCCSALSHADINCLCSYKNSNLLPS--------------L-G----I--DPKLAMQLPGKCKLPHPANC
1B1U Chain:A ((11-109))
-----AIPHNPLDSCRWYVSTRTCGVGPRLATQEMKARCCRQLEAIPAYCRCEAVRILMDGVVTPSGQHEGRLLQDLPGCPRQVQRAFAPKLVTEVECNLATIH--
General information:
TITO was launched using:
RESULT:
Template:
1B1U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -17384 for 454 contacts (-38.3/contact) +
2D Compatibility (PS) -6956 + (NN) -2764 + (LL) 380
1D Compatibility (HY) -2800 + (ID) 800
Total energy: -30324.0 ( -66.79 by residue)
QMean score : 0.293
(partial model without unconserved sides chains):
PDB file :
Tito_1B1U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B1U-query.scw
PDB file :
Tito_Scwrl_1B1U.pdb
: