Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QSVCNVPISGLMACKPAVTPPNPSAPTSACCSALTHAD----------MRCLCSYKNSNVLPSL-GIDPNLALQLPPKCKLPRPNC
2ALG Chain:A ((3-79))
--TCGQVSSSLAPCIPYVRGG--GAVPPACCNGIRNVNNLARTTPDRQAACNC-LKQL--SASVPGVNPNNAAALPGKCGVSIP--
General information:
TITO was launched using:
RESULT:
Template:
2ALG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -36045 for 424 contacts (-85.0/contact) +
2D Compatibility (PS) -6636 + (NN) -5976 + (LL) -68
1D Compatibility (HY) -2400 + (ID) 1150
Total energy: -52275.0 ( -123.29 by residue)
QMean score : 0.354
(partial model without unconserved sides chains):
PDB file :
Tito_2ALG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ALG-query.scw
PDB file :
Tito_Scwrl_2ALG.pdb
: