Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QSICNVSISGLTSCSPAVT----PPNPAP----PTSACCSALSHADLRCLCSYKNSTLLP--------------SL-G--ID----QKLPLKLPEKCRLPHRAPC
1B1U Chain:A ((11-108))
----AIPHNPLDSCRWYVSTRTCGVGPRLATQEMKARCCRQLEAIPAYCRCEAVRILMDGVVTPSGQHEGRLLQDLPGCPRQVQRAFAPKLVTEVECNLATI---
General information:
TITO was launched using:
RESULT:
Template:
1B1U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -21228 for 437 contacts (-48.6/contact) +
2D Compatibility (PS) -6802 + (NN) -914 + (LL) 412
1D Compatibility (HY) -2400 + (ID) 750
Total energy: -31682.0 ( -72.50 by residue)
QMean score : 0.347
(partial model without unconserved sides chains):
PDB file :
Tito_1B1U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B1U-query.scw
PDB file :
Tito_Scwrl_1B1U.pdb
: