Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AVCDMSNEQFMSCQPAAAKTT--DPPAAP----SQACCDALAGADLKCLCGYKNSPW------MGV-YN----ID---------PKRAMEL--PAKCGLATPPDC
1BEA Chain:A ((13-109))
-----PHNPLPSCRWYVTSRTCGIGPRLPWPELKRRCCRELADIPAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFAATLVTEAECNLATI---
General information:
TITO was launched using:
RESULT:
Template:
1BEA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -15310 for 406 contacts (-37.7/contact) +
2D Compatibility (PS) -7339 + (NN) -3643 + (LL) 364
1D Compatibility (HY) -800 + (ID) 950
Total energy: -27678.0 ( -68.17 by residue)
QMean score : 0.503
(partial model without unconserved sides chains):
PDB file :
Tito_1BEA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BEA-query.scw
PDB file :
Tito_Scwrl_1BEA.pdb
: