Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QPQQSCTASLTGLNVCAPFLV-----PGSPTA----STECCNAVQSINHDCMCNTMR--------------------------------IAAQI--PAQCNLPPLSCSAN
1BEA Chain:A ((15-109))
----------NPLPSCRWYVTSRTCGIGPRLPWPELKRRCCRELADIPAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFAATLVTEAECNLATI-----
General information:
TITO was launched using:
RESULT:
Template:
1BEA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44372 for 308 contacts (-144.1/contact) +
2D Compatibility (PS) -5536 + (NN) -5062 + (LL) 656
1D Compatibility (HY) -5200 + (ID) 700
Total energy: -60214.0 ( -195.50 by residue)
QMean score : 0.549
(partial model without unconserved sides chains):
PDB file :
Tito_1BEA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BEA-query.scw
PDB file :
Tito_Scwrl_1BEA.pdb
: