Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QICTS----QLNSLNVCAPFVVP-----GAPNTNPSTDCCNALGAVQHDCLCSTLQIAARLPSQCNLPPITCGN-----------------------------------------------
1HSS Chain:A ((5-124))
-MCYPGQAFQVPALPACRPLLRLQCNGSQVP-EAVLRDCCQQLAHISEWCRCGALYSMLDS--MYKEH------GAFPRCRREVVKLTAASITAVCRLPIVVDASGDGAYVCKDVAAYPDA
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29616 for 322 contacts (-92.0/contact) +
2D Compatibility (PS) -5331 + (NN) 3125 + (LL) -208
1D Compatibility (HY) -3600 + (ID) 650
Total energy: -36280.0 ( -112.67 by residue)
QMean score : 0.416
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: