Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGECGKTPIRSAA--ASLSPCLTAVGNVRAS-----------------VPPACCSKVGALIKTAPKCLCAVLLSPL---A---MQAGI---KPGIAITIPKRCNIKNRPVGKKCGRYTVP
1W2Q Chain:A ((15-112))
-------SCERQVDRVNLKPCEQHIMQRIMGEQEQYDSYDIRSTRSSDQQQRCCDELNEME-NTQGCMCEALQQIMENQCDRLQDRQMVQQFKRELMSLPQQCNFR--------------
General information:
TITO was launched using:
RESULT:
Template:
1W2Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -58546 for 443 contacts (-132.2/contact) +
2D Compatibility (PS) -6553 + (NN) 2657 + (LL) 348
1D Compatibility (HY) -4000 + (ID) 550
Total energy: -66644.0 ( -150.44 by residue)
QMean score : 0.287
(partial model without unconserved sides chains):
PDB file :
Tito_1W2Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1W2Q-query.scw
PDB file :
Tito_Scwrl_1W2Q.pdb
: