Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTLCDIDDKGLADCKPSVT----QPNPVD----PSPDCCEALKGADLACLCSYKNSMWLP--------------SF-G--ID----PMLALSLPPKCNLQMPPNC
1B1U Chain:A ((12-109))
-----IPHNPLDSCRWYVSTRTCGVGPRLATQEMKARCCRQLEAIPAYCRCEAVRILMDGVVTPSGQHEGRLLQDLPGCPRQVQRAFAPKLVTEVECNLATIH--
General information:
TITO was launched using:
RESULT:
Template:
1B1U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26877 for 435 contacts (-61.8/contact) +
2D Compatibility (PS) -7024 + (NN) -2917 + (LL) 392
1D Compatibility (HY) -2000 + (ID) 750
Total energy: -39176.0 ( -90.06 by residue)
QMean score : 0.320
(partial model without unconserved sides chains):
PDB file :
Tito_1B1U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B1U-query.scw
PDB file :
Tito_Scwrl_1B1U.pdb
: