Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QSSSSCTNVLV--SMSPCLDYIQGNSS----------KP-----------SSSCCSQLANVVRSQPQCLCEVLNGG-ASS-----L-G--VSVNQTQAMALPTACNVKTPPASQCNATIL
1PSY Chain:A ((16-116))
---QQCRQEVQRKDLSSCERYLRQSSSRRSTGEEVLRMPGDENQQQESQQLQQCCNQVKQV---RDECQCEAIKYIAEDQIQQGQLHGEESERVAQRAGEIVSSCGV-------------
General information:
TITO was launched using:
RESULT:
Template:
1PSY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32701 for 468 contacts (-69.9/contact) +
2D Compatibility (PS) -7255 + (NN) -1327 + (LL) 952
1D Compatibility (HY) -3600 + (ID) 950
Total energy: -44881.0 ( -95.90 by residue)
QMean score : 0.304
(partial model without unconserved sides chains):
PDB file :
Tito_1PSY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1PSY-query.scw
PDB file :
Tito_Scwrl_1PSY.pdb
: