Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QAACASKLTPCFPFLNNATAQPTADCCNPIKDTVAN-DLECLCNLYNDPNLLSSLNITVAAALRI-SRECGVTTDLSACNV
1HYP Chain:A ((10-72))
------DLSICLNILGGSLGT-VDDCCALIGGLGDIEAIVCLCIQLRA----LGI-LNLNRNLQLILNSCGRSYP------
General information:
TITO was launched using:
RESULT:
Template:
1HYP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33159 for 356 contacts (-93.1/contact) +
2D Compatibility (PS) -6334 + (NN) -2612 + (LL) 952
1D Compatibility (HY) -6400 + (ID) 650
Total energy: -48203.0 ( -135.40 by residue)
QMean score : 0.368
(partial model without unconserved sides chains):
PDB file :
Tito_1HYP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HYP-query.scw
PDB file :
Tito_Scwrl_1HYP.pdb
: