Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QDPITPGPTIADCSPRLVALMPCAPFVQ----GT-AQMP----AQSCCDNLNQLYTLQPGCLCLLLND---TT------LSD------F---PINR--TRALQL--PVLCKLQANA--SACSEID
1BEA Chain:A ((16-116))
------------------PLPSCRWYVTSRTCGIGPRLPWPELKRRCCRELADI---PAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFAATLVTEAECNLATISGVAECP---
General information:
TITO was launched using:
RESULT:
Template:
1BEA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -49812 for 378 contacts (-131.8/contact) +
2D Compatibility (PS) -6979 + (NN) -1340 + (LL) 940
1D Compatibility (HY) -3200 + (ID) 850
Total energy: -61241.0 ( -162.01 by residue)
QMean score : 0.372
(partial model without unconserved sides chains):
PDB file :
Tito_1BEA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BEA-query.scw
PDB file :
Tito_Scwrl_1BEA.pdb
: