Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QAPAPEPTAEAPGPDCFTNLLSLSDCLTYVEAGS---NLTKP----EKPCCPELAGLVESTPQCLCYLLDKNATS---SYGF-------N------IDM--NRALNL--PTVCKVSTPPVSLCSG
1BEA Chain:A ((16-109))
---------------------PLPSCRWYVTSRTCGIGPRLPWPELKRRCCRELADI---PAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFAATLVTEAECNLATI-------
General information:
TITO was launched using:
RESULT:
Template:
1BEA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31717 for 397 contacts (-79.9/contact) +
2D Compatibility (PS) -7166 + (NN) -3378 + (LL) 844
1D Compatibility (HY) -2000 + (ID) 850
Total energy: -44267.0 ( -111.50 by residue)
QMean score : 0.310
(partial model without unconserved sides chains):
PDB file :
Tito_1BEA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BEA-query.scw
PDB file :
Tito_Scwrl_1BEA.pdb
: