Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
DVNQDKTECANQLV--GLASCLPYVGGQ----S------KTP-----------TIDCCSGLKQVLDKSRKCLCVLIKDRDDP-----SL-G--LKINATLAATLPSTCHAPVNMTECI
1PSY Chain:A ((16-116))
------QQCRQEVQRKDLSSCERYLRQSSSRRSTGEEVLRMPGDENQQQESQQLQQCCNQVKQV---RDECQCEAIKYIAEDQIQQGQLHGEESERVAQRAGEIVSSCGV--------
General information:
TITO was launched using:
RESULT:
Template:
1PSY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -37984 for 475 contacts (-80.0/contact) +
2D Compatibility (PS) -7007 + (NN) -1988 + (LL) 904
1D Compatibility (HY) -2800 + (ID) 1100
Total energy: -49975.0 ( -105.21 by residue)
QMean score : 0.243
(partial model without unconserved sides chains):
PDB file :
Tito_1PSY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1PSY-query.scw
PDB file :
Tito_Scwrl_1PSY.pdb
: