Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LTCPEVSKALVPCVTYLA---TGS-SF----VHCCTQIRLLNSKANTTSDRQGVCRCLTSLAAQFQRR----HR----LNFNLVKQLPGKCNVNIRYNITTQNPNCSQVK
1HSS Chain:A ((15-107))
-------PALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHI--------SEWCRCGALYSMLDSMYKEHGAFPRCRREVVKLTAASITAVCRLPIVVDA-----------
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -59555 for 409 contacts (-145.6/contact) +
2D Compatibility (PS) -7055 + (NN) -3535 + (LL) 836
1D Compatibility (HY) -2800 + (ID) 750
Total energy: -72859.0 ( -178.14 by residue)
QMean score : 0.261
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: