Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QRVCGMSKEGFQACEPSVSSA----NPHPP--PPSPACCMALNDADLQCFCFFKNSKMLNA--------------Y-G--ID----FDRATALPVQCNLVKSFHC
1B1U Chain:A ((13-108))
------PHNPLDSCRWYVSTRTCGVGPRLATQEMKARCCRQLEAIPAYCRCEAVRILMDGVVTPSGQHEGRLLQDLPGCPRQVQRAFAPKLVTEVECNLATI---
General information:
TITO was launched using:
RESULT:
Template:
1B1U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -14065 for 451 contacts (-31.2/contact) +
2D Compatibility (PS) -6875 + (NN) -358 + (LL) 736
1D Compatibility (HY) -2000 + (ID) 800
Total energy: -23362.0 ( -51.80 by residue)
QMean score : 0.129
(partial model without unconserved sides chains):
PDB file :
Tito_1B1U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B1U-query.scw
PDB file :
Tito_Scwrl_1B1U.pdb
: