Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
----QAQCGGRNLSILAPCLPAAKANVQPSA--------ACCRALSSFATNTGEDCLCAAASSQQQSGAKVEFAKYIPQKCQLTYKAG---IVCNGVVIPGGQ
2LZ0 Chain:A ((1-100))
GSHEGEPVVGMDKSLFAGNTVIREITVQPNIGLLYDGMFSGCTALEKLIL-TGEDPSAYSAGDGLRDGA--DFLICVPEEALDRYRRDYFWQTYAAWIQPMEQ
General information:
TITO was launched using:
RESULT:
Template:
2LZ0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29205 for 499 contacts (-58.5/contact) +
2D Compatibility (PS) -8806 + (NN) -144 + (LL) 176
1D Compatibility (HY) -800 + (ID) 1050
Total energy: -39829.0 ( -79.82 by residue)
QMean score : 0.142
(partial model without unconserved sides chains):
PDB file :
Tito_2LZ0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LZ0-query.scw
PDB file :
Tito_Scwrl_2LZ0.pdb
: