Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VCDMDNDDFMACQPAAAATTSPTPPDPSAACCATLGKADLKCLCSYKKSPW------LSL-YN----ID---------PKRAMEL--PAKCGLSPPADC
1BEA Chain:A ((41-110))
---------------------------KRRCCRELADIPAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFAATLVTEAECNLATIS--
General information:
TITO was launched using:
RESULT:
Template:
1BEA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8850 for 222 contacts (-39.9/contact) +
2D Compatibility (PS) -4951 + (NN) -2559 + (LL) 640
1D Compatibility (HY) -400 + (ID) 550
Total energy: -16670.0 ( -75.09 by residue)
QMean score : 0.246
(partial model without unconserved sides chains):
PDB file :
Tito_1BEA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BEA-query.scw
PDB file :
Tito_Scwrl_1BEA.pdb
: