Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGECGATPADQMALKLAPCLTAAKDPEA---------------SPSKSCCAAVVDIWGHSTECLCAVLLSNTL----K-RFG---V--KVEVAITIPKRCNIANRPIGYKCGDYTLPSLQD
1SM7 Chain:A ((14-104))
--------------HLRACQQWIRQQLAGSPFSENQWGPQQGPSLREQCCNELYQE---DQVCVCPTLKQAAKSVRVQGQHGPFQSTRIYQIAKNLPNVCNMKQ--IGTC-----------
General information:
TITO was launched using:
RESULT:
Template:
1SM7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -54067 for 434 contacts (-124.6/contact) +
2D Compatibility (PS) -6550 + (NN) -481 + (LL) 900
1D Compatibility (HY) -2800 + (ID) 800
Total energy: -63798.0 ( -147.00 by residue)
QMean score : 0.244
(partial model without unconserved sides chains):
PDB file :
Tito_1SM7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SM7-query.scw
PDB file :
Tito_Scwrl_1SM7.pdb
: