Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
WTVNIPTPQSSCPLANPLSLNVCVDLLGLVHVVLGNPSTVECCDIINGLGI-------DATVCLCTAIHLKVLGL-NVDIPLALKLLVTCGRELP----NGLTC
2ALG Chain:A ((7-88))
---------------VSSSLAPCIPYVRG-----GGAVPPACCNGIRNVNNLARTTPDRQAACNC--LKQLSASVPGVNPNNAAALPGKCGVSIPYKISASTNC
General information:
TITO was launched using:
RESULT:
Template:
2ALG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -52176 for 438 contacts (-119.1/contact) +
2D Compatibility (PS) -7275 + (NN) -3175 + (LL) 1588
1D Compatibility (HY) -400 + (ID) 800
Total energy: -62238.0 ( -142.10 by residue)
QMean score : 0.422
(partial model without unconserved sides chains):
PDB file :
Tito_2ALG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ALG-query.scw
PDB file :
Tito_Scwrl_2ALG.pdb
: