Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AQCNGSPAMLASCLPATQSST----S-Y----PGAQCCSSLTRFRGNPDCLCSTMLTARQQ----------------F-----TFSVPNAFTI--PERCGYANEIPPHYKCGNYVVGH
1BEA Chain:A ((16-108))
--------PLPSCRWYVTSRTCGIGPRLPWPELKRRCCRELADI--PAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFAATLVTEAECNLAT---------------
General information:
TITO was launched using:
RESULT:
Template:
1BEA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -37204 for 398 contacts (-93.5/contact) +
2D Compatibility (PS) -5986 + (NN) 1477 + (LL) 352
1D Compatibility (HY) -3600 + (ID) 700
Total energy: -45661.0 ( -114.73 by residue)
QMean score : 0.260
(partial model without unconserved sides chains):
PDB file :
Tito_1BEA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BEA-query.scw
PDB file :
Tito_Scwrl_1BEA.pdb
: