Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ATCTFESTLPDLADCRPYVST----GSTQT-------DPTAACCSELRNVGHSCLCDLLRD---------TKVP---SDIDINRAVALPGKCSLPGADSCS
2LVF Chain:A ((16-106))
---------QMLSHCRMYMRQQMEESTYQTMPRRGMEPHMSECCEQLEGMDESCRCEGLRMMMRMMQQKEMQPRGEQMRRMMRLAENIPSRCNLS-PMRCP
General information:
TITO was launched using:
RESULT:
Template:
2LVF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -15981 for 377 contacts (-42.4/contact) +
2D Compatibility (PS) -7192 + (NN) -1768 + (LL) 568
1D Compatibility (HY) -4400 + (ID) 950
Total energy: -29723.0 ( -78.84 by residue)
QMean score : 0.497
(partial model without unconserved sides chains):
PDB file :
Tito_2LVF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LVF-query.scw
PDB file :
Tito_Scwrl_2LVF.pdb
: