Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QQQSCSDWTQLLDCQNAASDPSA---------------TPSGECCNRIRQYQNAPDCLCTMLLAARNAAQSTGL----P--FNLQAALSIPAKCHVQVPSGYSCAGIPIPSS
1SM7 Chain:A ((14-106))
---------HLRACQQWIRQQLAGSPFSENQWGPQQGPSLREQCCNELYQE--DQVCVCPTLKQAAKSVRVQGQHGPFQSTRIYQIAKNLPNVCNMKQI--GTCPF------
General information:
TITO was launched using:
RESULT:
Template:
1SM7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -35494 for 507 contacts (-70.0/contact) +
2D Compatibility (PS) -7432 + (NN) -3752 + (LL) 404
1D Compatibility (HY) -2000 + (ID) 900
Total energy: -49174.0 ( -96.99 by residue)
QMean score : 0.222
(partial model without unconserved sides chains):
PDB file :
Tito_1SM7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SM7-query.scw
PDB file :
Tito_Scwrl_1SM7.pdb
: