Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ATCSNDFTALLPCQAATQDAQ-----AT----PTAACCSVVEKFKDDPACLCSTIAA---AK--SAG---------IS---IN----EANAESIPTRCKFQGYPSCAKKI
1B1U Chain:A ((16-108))
--------PLDSCRWYVSTRTCGVGPRLATQEMKARCCRQLEAI--PAYCRCEAVRILMDGVVTPSGQHEGRLLQDLPGCPRQVQRAFAPKLVTEVECNLATI-------
General information:
TITO was launched using:
RESULT:
Template:
1B1U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27832 for 377 contacts (-73.8/contact) +
2D Compatibility (PS) -6371 + (NN) -487 + (LL) 604
1D Compatibility (HY) -3200 + (ID) 550
Total energy: -37836.0 ( -100.36 by residue)
QMean score : 0.399
(partial model without unconserved sides chains):
PDB file :
Tito_1B1U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B1U-query.scw
PDB file :
Tito_Scwrl_1B1U.pdb
: