Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ATCSNNYSALLPCAAATR----SATA-T----PSAACCKVVEGFKSNPACLCSTIAA---ARAAG---------YS--------INEHNAESI--PTRCKLHGYTPCSKKN
1BEA Chain:A ((16-109))
--------PLPSCRWYVTSRTCGIGPRLPWPELKRRCCRELADI--PAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFAATLVTEAECNLATI-------
General information:
TITO was launched using:
RESULT:
Template:
1BEA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -39320 for 366 contacts (-107.4/contact) +
2D Compatibility (PS) -6492 + (NN) -870 + (LL) 152
1D Compatibility (HY) -4800 + (ID) 450
Total energy: -51780.0 ( -141.48 by residue)
QMean score : 0.451
(partial model without unconserved sides chains):
PDB file :
Tito_1BEA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BEA-query.scw
PDB file :
Tito_Scwrl_1BEA.pdb
: