Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ACSNNYIQLAGCLNAVSS----SAG-Y----PGSSCCTAVSHFKNDVNCLCSTLVA---AKN------AG---VI--------RNMPNALTV--PKRCGFKNNIPKNFRCAGYKVGS
1BEA Chain:A ((16-108))
-------PLPSCRWYVTSRTCGIGPRLPWPELKRRCCRELADI--PAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFAATLVTEAECNLAT---------------
General information:
TITO was launched using:
RESULT:
Template:
1BEA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -35803 for 366 contacts (-97.8/contact) +
2D Compatibility (PS) -6202 + (NN) 1747 + (LL) 668
1D Compatibility (HY) -3200 + (ID) 600
Total energy: -43390.0 ( -118.55 by residue)
QMean score : 0.416
(partial model without unconserved sides chains):
PDB file :
Tito_1BEA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BEA-query.scw
PDB file :
Tito_Scwrl_1BEA.pdb
: