Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
GCGPKLGVLLPCLPFLQGQ-----GSNP----TQPCCNGLETVVKSNPACLCALVNS-------QLGN---------------RINITLALSL--PSLCNLAGVTIDLCN
1BEA Chain:A ((16-109))
-------PLPSCRWYVTSRTCGIGPRLPWPELKRRCCRELADI---PAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFAATLVTEAECNLATI------
General information:
TITO was launched using:
RESULT:
Template:
1BEA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -51430 for 349 contacts (-147.4/contact) +
2D Compatibility (PS) -6307 + (NN) -1770 + (LL) 200
1D Compatibility (HY) -3200 + (ID) 700
Total energy: -63207.0 ( -181.11 by residue)
QMean score : 0.433
(partial model without unconserved sides chains):
PDB file :
Tito_1BEA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BEA-query.scw
PDB file :
Tito_Scwrl_1BEA.pdb
: