Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGECGNASPDTEAWKLAPCAAAAQNEKA---------------APSKSCCLQVKKIGQNPDCLCAVMLSNTAKS--SG-I-------XPEVAVTIPKRCNLADRPVGYKCGAYTLP
1SM7 Chain:A ((14-100))
--------------HLRACQQWIRQQLAGSPFSENQWGPQQGPSLREQCCNELYQE--DQVCVCPTLKQAAKSVRVQGQHGPFQSTRIYQIAKNLPNVCNMKQ-------------
General information:
TITO was launched using:
RESULT:
Template:
1SM7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31888 for 413 contacts (-77.2/contact) +
2D Compatibility (PS) -6123 + (NN) -2760 + (LL) 528
1D Compatibility (HY) -2800 + (ID) 600
Total energy: -43643.0 ( -105.67 by residue)
QMean score : 0.000
(partial model without unconserved sides chains):
PDB file :
Tito_1SM7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SM7-query.scw
PDB file :
Tito_Scwrl_1SM7.pdb
: