Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
DTSPSQCKEERNLLVNACRPVIYG-RSPSADCCQRVRVSHV----------ECVCPYVTPKTAAIIGVIGVDNVVKKIEGCGRTVP----RKFKCGSITTP
1SIY Chain:A ((2-90))
-----TCGQVQGNL-AQCIGFLQKGGVVPPSCCTGVKNILNSSRTTADRRAVCSCLKAA--AGAV-RGINPNNAEALPGKCGVNIPYKISTSTNCNSI---
General information:
TITO was launched using:
RESULT:
Template:
1SIY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27457 for 515 contacts (-53.3/contact) +
2D Compatibility (PS) -7391 + (NN) 605 + (LL) 64
1D Compatibility (HY) -1200 + (ID) 850
Total energy: -36229.0 ( -70.35 by residue)
QMean score : 0.155
(partial model without unconserved sides chains):
PDB file :
Tito_1SIY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SIY-query.scw
PDB file :
Tito_Scwrl_1SIY.pdb
: