Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QTICNMSGEGLMACKPAVS----PPNPAP----PSAACCSALSHADMHCLCSYRNSKLLPS--------------M-G--ID----PNLALQLPKKCKFPNAAHC
1B1U Chain:A ((11-109))
----AIPHNPLDSCRWYVSTRTCGVGPRLATQEMKARCCRQLEAIPAYCRCEAVRILMDGVVTPSGQHEGRLLQDLPGCPRQVQRAFAPKLVTEVECNLATIH--
General information:
TITO was launched using:
RESULT:
Template:
1B1U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -28003 for 448 contacts (-62.5/contact) +
2D Compatibility (PS) -7272 + (NN) -4553 + (LL) 532
1D Compatibility (HY) -2400 + (ID) 700
Total energy: -42396.0 ( -94.63 by residue)
QMean score : 0.353
(partial model without unconserved sides chains):
PDB file :
Tito_1B1U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B1U-query.scw
PDB file :
Tito_Scwrl_1B1U.pdb
: