Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QSGCTTVLIGMAPCLNYITGSS---SSP---SSSCCSQLASVVQSQPRCLCVALNGG-GA---ALGIT--------INRTLALALPGACNVQTPPVSQCDAA
1HSS Chain:A ((16-103))
---------ALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHI---SEWCRCGALYSMLDSMYKEH--GAFPRCRREVVKLTAASITAVCRLPI---------
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44949 for 376 contacts (-119.5/contact) +
2D Compatibility (PS) -6029 + (NN) -750 + (LL) 1240
1D Compatibility (HY) -3600 + (ID) 650
Total energy: -54738.0 ( -145.58 by residue)
QMean score : 0.213
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: