Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGECGKTPIQSAAASLSSCLSAAGNAK----AK-----VPPTCCTKVTALINTAPKCLCAVVLSP---LAKK---------A--------GIKPAIAITI--PKRCNIKNRPVGKKCGSYIIP
1BEA Chain:A ((16-109))
--------------PLPSCRWYVTSRTCGIGPRLPWPELKRRCCRELADI---PAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFAATLVTEAECNLATI------------
General information:
TITO was launched using:
RESULT:
Template:
1BEA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33921 for 394 contacts (-86.1/contact) +
2D Compatibility (PS) -5865 + (NN) 2857 + (LL) 1064
1D Compatibility (HY) -3600 + (ID) 550
Total energy: -40015.0 ( -101.56 by residue)
QMean score : 0.285
(partial model without unconserved sides chains):
PDB file :
Tito_1BEA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BEA-query.scw
PDB file :
Tito_Scwrl_1BEA.pdb
: